1 to 10 of 22 literature results

• Conserved distances between vertebrate highly conserved elements.

  High numbers of sequence element with very high (>95%) sequence conservation between the human and other vertebrate genomes have been reported and asc…

  Authors: Hong Sun, Geir Skogerbø, Runsheng Chen

  Source: Human molecular genetics. 2006 Oct 1

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• NONCODE v2.0: decoding the non-coding.

  The NONCODE database is an integrated knowledge database designed for the analysis of non-coding RNAs (ncRNAs). Since NONCODE was first released 3 yea…

  Authors: Shunmin He, Changning Liu, Geir Skogerbø, Haitao Zhao, Jie Wang, Tao Liu, Baoyan Bai, Yi Zhao, Runsheng Chen

  Source: Nucleic acids research. 2008 Jan

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• Systematic identification and characterization of chicken (Gallus gallus) ncRNAs.

  Recent studies have demonstrated that non-coding RNAs (ncRNAs) play important roles during development and evolution. Chicken, the first genome-sequen…

  Authors: Yong Zhang, Jie Wang, Shoujun Huang, Xiaopeng Zhu, Jun Liu, Ning Yang, Dandan Song, Rimao Wu, Wei Deng, Geir Skogerbø,…

  Source: Nucleic acids research. 2009 Oct

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• Mapping the C. elegans noncoding transcriptome with a whole-genome tiling microarray.

  The number of annotated protein coding genes in the genome of Caenorhabditis elegans is similar to that of other animals, but the extent of its non-pr…

  Authors: Housheng He, Jie Wang, Tao Liu, X Shirley Liu, Tiantian Li, Yunfei Wang, Zuwei Qian, Haixia Zheng, Xiaopeng Zhu, Tao Wu,…

  Source: Genome research. 2007 Oct

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• Assessing TF regulatory relationships of divergently transcribed genes.

  Ambiguously located transcription factor (TF) binding sites may introduce a large number of potentially erroneous regulatory associations into models …

  Authors: Lan Chen, Lun Cai, Geir Skogerbø, Yi Zhao, Runsheng Chen

  Source: Genomics. 2008 Nov

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• Organization of the Caenorhabditis elegans small non-coding transcriptome: genomic features, biogenesis, and expression.

  Recent evidence points to considerable transcription occurring in non-protein-coding regions of eukaryote genomes. However, their lack of conservation…

  Authors: Wei Deng, Xiaopeng Zhu, Geir Skogerbø, Yi Zhao, Zhuo Fu, Yudong Wang, Housheng He, Lun Cai, Hong Sun, Changning Liu,…

  Source: Genome research. 2006 Jan

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• Profiling Caenorhabditis elegans non-coding RNA expression with a combined microarray.

  Small non-coding RNAs (ncRNAs) are encoded by genes that function at the RNA level, and several hundred ncRNAs have been identified in various organis…

  Authors: Housheng He, Lun Cai, Geir Skogerbø, Wei Deng, Tao Liu, Xiaopeng Zhu, Yudong Wang, Dong Jia, Zhihua Zhang, Yong Tao,…

  Source: Nucleic acids research. 2006

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• NPInter: the noncoding RNAs and protein related biomacromolecules interaction database.

  The noncoding RNAs and protein related biomacromolecules interaction database (NPInter; http://bioinfo.ibp.ac.cn/NPInter or http://www.bioinfo.org.cn/…

  Authors: Tao Wu, Jie Wang, Changning Liu, Yong Zhang, Baochen Shi, Xiaopeng Zhu, Zhihua Zhang, Geir Skogerbø, Lan Chen, Hongchao Lu,…

  Source: Nucleic acids research. 2006 Jan 1

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• NONCODE: an integrated knowledge database of non-coding RNAs.

  NONCODE is an integrated knowledge database dedicated to non-coding RNAs (ncRNAs), that is to say, RNAs that function without being translated into pr…

  Authors: Changning Liu, Baoyan Bai, Geir Skogerbø, Lun Cai, Wei Deng, Yong Zhang, Dongbo Bu, Yi Zhao, Runsheng Chen

  Source: Nucleic acids research. 2005 Jan 1

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• The interactome as a tree--an attempt to visualize the protein-protein interaction network in yeast.

  The refinement and high-throughput of protein interaction detection methods offer us a protein-protein interaction network in yeast. The challenge com…

  Authors: Hongchao Lu, Xiaopeng Zhu, Haifeng Liu, Geir Skogerbø, Jingfen Zhang, Yong Zhang, Lun Cai, Yi Zhao, Shiwei Sun, Jingyi Xu,…

  Source: Nucleic acids research. 2004

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